R - a language for data analysis and graphics

NAME SYNOPSIS DESCRIPTION OPTIONS Commands: REPORTING BUGS COPYRIGHT SEE ALSO

NAME

R − a language for data analysis and graphics

SYNOPSIS

R [options] [< infile] [> outfile]
R CMD command [arguments]

DESCRIPTION

Start R, a system for statistical computation and graphics, with the specified options, or invoke an R tool via the ’R CMD’ interface.

R is a language which bears a passing resemblance to the S language developed at AT&T Bell Laboratories. It provides support for a variety of statistical and graphical analyses. R is a true computer language which contains a number of control-flow constructions for iteration and alternation. It allows users to add additional functionality by defining new functions.

On systems which have the GNU readline(3) library, R will maintain a command history, so that commands can be recalled, edited and re-executed.

OPTIONS

Most options control what happens at the beginning and at the end of an R session, in particular which files are being read and written, and how much memory is reserved for the R process.
−h, −−help

Print short help message and exit

−−version

Print version info and exit

−−encoding=ENC

Specify encoding to be used for stdin

	−−encoding ENC
	RHOME

Print path to R home directory and exit

−−save

Do save workspace at the end of the session

−−no−save

Don’t save it

−−no−environ

Don’t read the site and user environment files

−−no−site−file

Don’t read the site-wide Rprofile

−−no−init−file

Don’t read the user R profile

−−restore

Do restore previously saved objects at startup

−−no−restore−data

Don’t restore previously saved objects

−−no−restore−history

Don’t restore the R history file

−−no−restore

Don’t restore anything

−−vanilla

Combine −−no−save, −−no−restore, −−no−site−file, −−no−init−file and −−no−environ

−−no−readline

Don’t use readline for command-line editing

−−max−ppsize=N

Set max size of protect stack to N

−−min−nsize=N

Set min number of fixed size obj’s ("cons cells") to N

−−min−vsize=N

Set vector heap minimum to N bytes; ’4M’ = 4 MegaB

−q, −−quiet

Don’t print startup message

−−silent

Same as −−quiet

−s, −−no−echo

Make R run as quietly as possible

−−interactive

Force an interactive session

−−verbose

Print more information about progress

−d, −−debugger=NAME

Run R through debugger NAME

−−debugger−args=ARGS

Pass ARGS as arguments to the debugger

−g TYPE, −−gui=TYPE

Use TYPE as GUI; possible values are ’X11’ (default) and ’Tk’.

−−arch=NAME

Specify a sub-architecture

−−args

Skip the rest of the command line

−f FILE, −−file=FILE

Take input from ’FILE’

−e EXPR

Execute ’EXPR’ and exit

FILE may contain spaces but not shell metacharacters.

Commands:

BATCH

Run R in batch mode

COMPILE

Compile files for use with R

SHLIB

Build shared library for dynamic loading

INSTALL

Install add-on packages

	REMOVE		Remove add-on packages
	build		Build add-on packages
	check		Check add-on packages
	LINK		Front-end for creating executable programs
	Rprof		Post-process R profiling files
	Rdconv		Convert Rd format to various other formats
	Rd2pdf		Convert Rd format to PDF
	Rd2txt		Convert Rd format to pretty text

Stangle

Extract S/R code from Sweave documentation

	Sweave		Process Sweave documentation
	Rdiff		Diff R output ignoring headers etc
	config		Obtain configuration information about R

javareconf

Update the Java configuration variables

rtags

Create Emacs-style tag files from C, R, and Rd files

Please use ’R CMD command −−help’ to obtain further information about the usage of ’command’.

Options −−arch, −−no−environ, −−no−init−file, −−no−site−file and −−vanilla can be placed between R and CMD, to apply to R processes run by ’command’

REPORTING BUGS

Report bugs at <https://bugs.R-project.org>.

COPYRIGHT

R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under the terms of the GNU General Public License versions 2 or 3. For more information about these matters see https://www.gnu.org/licenses/.